Remote whitespace at the ends of lines.
Remove blank lines from the ends of files.
Change modes on source files so that they
are not executable.

Signed-off-by: Dan Cross <cross@gajendra.net>

Bad remote file systems can change mtime unexpectedly,
and then there is the problem that git rebase and similar
operations like to change the files and then change them back,
modifying the mtimes but not the content.

Avoid spurious Put errors on both of those by checking file
content.

(False positive "modified since last read" make the real ones
difficult to notice.)

1. Make sure cmdname NUL-terminates its arguments.
2. Fix the elogapply warning, hopefully.

Lots of new code imported.

Also add acme!